Friday, December 25, 2015


Astrocyte research may lead to development of novel and improved treatments of autism/neurodevelopmental disorders



Astrocytes are star shaped glial cells in CNS (central nervous system) of mammalian brain which are derived from neural stem cells during early embryogenesis and express the marker Glial Fibrillary Acidic Protein GFAP. These astrocytes play an important role in pathogenesis of autism and other neurodevelopmental disorders such as Rett syndrome and FXS (Fragile X  Syndrome) that result from synaptic defects. Astrocytes can modulate synaptogenesis (by releasing molecular signals such as thrombospondin/TSP that specifically increases number of excitatory synapses) during their developmental maturation in CNS and play an active role in synaptic physiology in the human brain [1]. In adult CNS astrocytes serve a number of regional functions such as axon guidance, control blood brain barrier and blood flow, synaptic support (regulation of synapse function and synaptic remodeling), maintaining brain homeostasis, regulating neuronal signaling, neuronal migration, protecting neurons from oxidative damage and determining the fate of endogenous neural precursors. Astrocytes also remove excess glutamate from extracellular space and supply glutamine to maintain glutamatergic neurotransmission.  Glutamate transporter dysregulation results in pathogenesis of FXS and other neurodevelopmental disorders. [2]

As astrocytes play essential roles in synaptic mechanisms astrocyte dysfunction contributes to behavioral disorders. Recent research found microglial activation, high level of GFAP (around 3 folds than normal) and neuroinflammation in individuals with autism spectrum disorders (ASD) which results in gliosis, reactive injury and disturbed neuronal migration during early gestation [3].

Another neurodevelopmental disorder Rett syndrome is characterized by mutation in MECP2 (methyl CpG binding protein 2), or loss of MECP2 gene which plays an important role (can modulate the expression of thousands of genes) in brain cells and astrocytes to provide physical and functional support for neurons [4]. Rett and ASD have some similar symptoms including learning and memory problem, repetitive behavior and lack of social interaction though Rett affects mainly girls and ADS affects boys.  

Fragile X syndrome, the most commonly inherited form of mental impairment is caused by glial cell dysfunction and transcriptional silencing of FMRP (Fragile X mentally retarded protein) gene by hypermethylation and CGG nucleotide repetition in FMR1 gene that turns off the gene.

Recent astrocyte research and development indicates their roles in motor neuron diseases and emphasize the potential of astrocytes/astroglia as therapeutic targets and agents in cell replacement therapy. A provocative study at University of Rochester Medical Center in 2013 found evidence that astrocyte provides restorative benefits of sleep by expending energy to drive water transport channels whose pumping action convects cerebrospinal fluid around neurons. They also found that knocking out the transport channels from astrocytes slows the clearance of neurotoxic molecules such as beta amyloid peptides deposited in Alzheimers disease by 65%. In large brain found in autistic and other psychiatric/neurodevelopmental patients the decreased efficiency of passive diffusion makes astrocyte driven active transport of toxic molecules crucial to survival.

Recently Laurie Doering a professor at Mcmaster University in Canada established a link by co-culturing healthy hippocampal neurons (that are responsible for learning and memory) and astrocytes. According to his research, in co-culture healthy hippocampal neurons exhibited delayed dendritic branching (a process of neural network building) and restricted the development of excitatory synapses. His research (for which he received a passion in science award by New England Biolabs) is actively working to identify new astrocyte based factors for the treatment of neuronal dysfunction using molecular, cellular and behavioral approaches. The interaction between astrocyte and secreted molecules from them and neurons leads to study how astrocyte dependent factors and signaling molecules can modulate the structure and physiology of FXS/ASD neurons [5]. A detailed understanding of how astrocytes regulate neural circuit development and their function in brain may lead to discovery of novel therapeutic treatment of ADS/FXS and other neurodevelopmental disorders.

Wednesday, November 18, 2015


Parkinson’s disease - a common challenge in elderly people


Parkinson's disease is a progressive neurodegenerative disorder named after British doctor James Parkinson where 75% of dopamine producing brain cells in substantia nigra part of brain is damaged and they cannot produce enough dopamine. Dopamine (C8H11NO2) is a neurotransmitter that regulates movement and emotional responses. So, lower dopamine results in the motor symptoms of Parkinson’s disease, such as movement problem, postural instability, tremor, rigidity, and walking problem. Non-motor symptoms include sleep disorder/insomnia, mental/mood disorders, orthostatic hypotension and hallucination/psychosis. Parkinson’s patients also have lewy bodies i.e. abnormally accumulated proteins (mainly alpha synuclein) inside their neuron cells.

Parkinson’s is of 3 types: primary or idiopathic (80%) which has no known cause,  secondary which is from exposure to external/environmental toxins such as pesticides, fungicides (maneb), herbicides (paraquat), insecticides (such as permethrin and beta HCH), heavy metals etc., and genetic (15%) which is genetically transferred. The most common genes involved are PARK2 (parkin), LRRK2 (leucine rich repeat kinase 2) and GBA (glucocerebrosidase) [1]. Mutations in any of these genes result in Parkinson’s. Recent research describes neuroepigenetics or epigenetic modifications in brain to explain the unexplained detail of Parkinson’s [2]. Another recent research in University of Copenhagen, Denmark, describes IFNβ gene may play a role in Parkinson’s [3]. A research study from National Center for Biological Sciences, Bangalore, found that Calcium can regulate the Dopamine level in brain cells [4].

Currently there is no permanent cure for Parkinson’s. Medications, exercise/physical therapy and neurosurgery such as deep brain stimulation (when medications can’t control the symptoms) can control the symptoms to some extent. The common medication includes carbidopa-levedopa (Rytary, Sinemet), dopamine agonists (that mimic dopamine effects in brain) such as pramipixole (mirapex) and ropinirole (Requip), MAO-B (monoamine oxidase B) inhibitors (that prevent dopamine breakdown) such as selegiline ( Eldepryl) and rasagiline (Azilect).  In 2015 FDA approved carbidopa-levedopa infusion drug Duopa that delivers in gel form directly to small intestine for patients with more advanced stage of Parkinson’s.

References
  1. http://www.parkinson.org/
  2. http://www.eurekalert.org/pub_releases/2015-11/vari-var111615.php
  3. http://www.sciencedaily.com/releases/2015/10/151009032457.htm
  4. http://www.sciencedaily.com/releases/2015/10/151008101305.htm

Wednesday, October 7, 2015


Immune disorders


Immune system malfunction results in 3 types of immune disorders: Autoimmune disorders, immunodeficiency disorders and allergies.
  • Autoimmune disorders occur when immune system becomes self-destructive i.e. it attacks its own healthy tissues/cells, e.g. rheumatoid arthritis, diabetes. According to American Autoimmune Related Diseases Association (AARDA) about 5-10% of US population suffers from autoimmune disorders.
  • Immunodeficiency weakens the immune system so that it is unable to produce antibodies and cannot fight against infections and diseases, e.g. SCID, Di-George Syndrome (DGS) etc.
  • Allergies are result of immune system's reaction with external substances called allergens such as pollen, certain food, pet dander etc. When immune system overreacts with the allergen it produces antibody IgE that triggers the release of histamine which causes the allergy symptoms (such as runny nose, itching/hives, fever, swelling/edema, vomiting etc.). Allergens are mostly harmless and most people are not allergen sensitive. Allergies can cause certain specific conditions such as eczema, sinus problem, and asthma. In some cases allergies can be life threatening such as anaphylaxis (caused by insect venom or certain food such as peanut and some type of medications).


Following are some immune system disorders:

SCID (Severe Combined Immunodeficiency) or Bubble boy syndrome: It is a genetic primary immunodeficiency which is characterized by defect of both B cell and T cell, and thus named as combined immunodeficiency. Among the 14 types of SCID the most common are XSCID (about 45% of cases) and ADASCID (about 15% of cases).

In XSCID or X linked SCID there is mutation in IL2-RG/CD132 gene (that codes common gamma chain protein which promotes the growth of T cells, B cells, NK cells) on X chromosome(X13) which mostly affects the male child as male has only one X chromosome(XY) in comparison with female(XX). As IL2RG gene is responsible for growth and maturation of T/B lymphocytes, mutation in this gene results in very low production of T cells, NK cells and causes defective/non-functional B cells. Symptoms of XSCID include very low level of IgG, pneumonitis, ear infection, failure to gain weight and to grow normally. The most effective treatments include bone marrow transplantation, intravenous immunoglobulin G therapy, and very recently discovered Gene-Transduced Autologous CD34+ Stem Cell therapy (phase 1 clinical trial) [1].

ADASCID results from the mutation in the gene on chromosome20 (autosome) that encodes the enzyme adenosine deaminase (ADA) which is essential for metabolic function of T cells. ADA helps eliminate deoxyadenosine, which is generated when DNA is broken down. So mutation in ADA results in precipitation of deoxyadenosine that is very toxic to lymphocyte. Symptoms include neurological problems, pneumonia, chronic diarrhea, and widespread skin rashes that affect both male and female child. Treatment includes BMT and gene therapy. Recent research in Boston Children’s Hospital applied gene therapy by reprogramming a patient’s immune system by viral vector transduction. In this method the patient’s abnormal bone marrow cells are interchanged with the functional version of the gene [2]. But patients have risk of having leukemia because the inserted DNA can be interfering with the normal functional gene.


Omenn syndrome: Another immunodeficiency (a type of SCID) results from missense mutations in recombinase activating genes RAG-1 and RAG-2 (on chromosome11) [3]. RAG-1 and RAG-2 are essential for gene recombination and generation of TCR and BCR. So a patient with this syndrome does not have B cells, but have auto reactive oligoclonal T cells [4]. Symptoms include skin inflammation in the form of red rashes (erythroderma), chronic diarrhea, lymphadenopathy, eosinophilia, poor growth and infections. Treatments include BMT but life expectancy is very low.


DiGeorge syndrome: It is a congenital primary immunodeficiency named after Dr Angelo DiGeorge. In this syndrome thymus and parathyroid gland are absent or abnormal, that results in T cell deficiency and low calcium level in blood. Also in this syndrome there is an autosomal mutation in chromosome 22q11.2, thus it is also known as 22q11.2/DGCR deletion syndrome [5]. Symptoms include congenital heart disease, defective immune system, cleft palate etc. This syndrome is diagnosed by FISH (Fluorescent In Situ Hybridization) blood test. No effective treatment is there for this disease.


Agammaglobulinemia: This can be of two types - X linked/Sex Linked (XLA) and Autosomal Recessive (ARA). It is a genetic immune disorder that is represented by very low level of immunoglobulin antibody due to genetic defect in B cells. In XLA (mainly affects male child as they have only one X chromosome) there is a mutation in Btk (Bruton’s Tyrosine Kinase) gene present in X chromosome that is responsible for B cell development and maturation. ARA is inherited as autosomal recessive trait and the patient does not have any circulating mature B cells as there is mutation in pre-B cell receptor [6]. The genes involved in ARA are µ heavy chain of IgM antibody, Igα chain, Igβ chain and an adaptor protein BLNK [7]. Diagnosis is done by serum immunoglobulin test and DNA analysis. Treatment includes intravenous and subcutaneous immunoglobulin (IgG) injection but this is not a permanent cure.


Rheumatoid Arthritis (RA): It is a chronic autoimmune disorder (when immune system attacks body’s own healthy tissues) that affects the joints and results in pain, stiffness (mainly in the morning), swelling and loss of function of joints. There is no known cause and no permanent cure of RA and women are more prone to this disorder. 1% of world population is affected by RA. Lifestyle changes, diet, aerobic exercise, yoga and certain medications can ease the RA symptoms. Medications include NSAIDs (Non Steroidal Anti-Inflammatory Drug) such as ibuprofen, celecoxib (a Cox2 inhibitor that is relatively safe for the stomach), corticosteroids such as prednisone, DMARDs (Disease Modifying Anti-Rheumatic Drug) such as methotrexate or baricitinib [8], sulfasalazine, Jak inhibitor (newest) such as tofacitinib and biologics drug (that are injectable and infusional) such as abatacept, anakinra etc. But all of these medications have serious side effects and so need to be taken only in very low doses and not for extended periods of time. A biopharmaceutical company (RuiYi) recently announced human dosing of a therapeutic antibody named Gerilimzumab (which is under clinical trial now) that targets cytokine IL-6 to treat RA [9]. Another very recent discovery includes cytokine IL27 as a regulator of inflammation in lymphoid rich RA, that was published in Journal of Experimental Medicine [10]. Recent studies found that some of RA drugs can increase the death risk of the patient. Recent research suggests that some genes such as HLA, STAT4 (which regulate and activate immune system), TRAF1&C5 (involved in chronic inflammation) and PTPN22 (involved in development and progression of RA), and inflammation on synovium (joint tissue lining) that cause cartilage damage are mainly responsible for RA [11]. Some specific tests such as rheumatoid factor antibody test, anti CCP (Cyclic Citrullinated Peptide) test, C reactive protein (CRP) test, Erythrocyte Sedimentation Rate (ESR) test could diagnose RA.


Sjogren's syndrome: It is chronic autoimmune disorder named after Dr Henrick Sjogren, where white blood cells attack body’s moisture producing glands such as saliva gland. Mostly women above 40 years age are affected by this disease and currently 4 million Americans are affected. The most common symptoms are dry eye, dry mouth, fatigue, and joint pain. This disease can also affect the kidney, lungs, pancreas, gastrointestinal system and CNS. Currently there is no cure for this disease.

Other than the above mentioned diseases there are various other types of immune system disorders including cancer of immune system cells i.e. B lymphocytes and T lymphocytes (lymphoma) and organs such as lymph nodes, spleen etc. One post is too short to describe all of them. I will try to explain some of them in future.

References:

  1. http://osp.od.nih.gov/sites/default/files/EFS-ADA_RAC120209.pdf
  2. http://www.childrenshospital.org
  3. http://www.researchgate.net/profile/Tayfun_Guengoer2/publication/46628483_Identical_mutations_in_RAG1_or_RAG2_genes_leading_to_defective_V(D)J_recombinase_activity_can_cause_either_T-B-_severe_combined_immune_deficiency_or_Omenn_syndrome/links/02e7e523bea3435c50000000.pdf
  4. http://www.jci.org/articles/view/41305
  5. http://www.chw.org/medical-care/endocrine/endocrine-conditions/disorders-affecting-calcium-metabolism/digeorge-syndrome
  6. https://www.orpha.net/data/patho/Pro/en/Agammaglobulinemia-FRenPro10310.pdf
  7. http://primaryimmune.org/about-primary-immunodeficiencies/specific-disease-types/agammaglobulinemia-x-linked-autosomal-recessive
  8. http://www.techtimes.com/articles/89555/20150930/eli-lilly-incyte-announce-baracitinib-superior-to-methotrexate-in-alleviating-rheumatoid-arthritis.htm
  9. http://www.anaphore.com/News/092215.htm
  10. Gareth W. Jones et al., Interleukin-27 inhibits ectopic lymphoid-like structure development in early inflammatory arthritis, Journal of Experimental Medicine, Sept 28, 2015, http://jem.rupress.org/content/early/2015/09/22/jem.20132307.abstract
  11. http://www.arthritis.org/about-arthritis/types/rheumatoid-arthritis/treatment.php


Friday, September 18, 2015

T cell and B cell: The immunity powerhouse


Our immune system protects us from various diseases that could be life threatening. Through immune response immune system distinguishes the invaders/intruders/pathogens that attack our body system and cause disease. Immune system is made with special type of cellular network, protein, tissue and organs that function together to protect against infection/disease. The key organs of the immune system are spleen, lymph nodes, adenoid, tonsils and thymus. Bone marrow also plays a vital role in immunity. Immune system releases the leukocytes lymphocyte and phagocyte. The lymphocytes are B lymphocyte/B cell and T lymphocyte/T cell that fight against foreign invaders called antigens (such as virus, bacteria, cancer cells, body fluid of diseased or sick person). These lymphocytes reside in lymphoid organs and circulate all over the body via lymphatic vessel.

T cells/T lymphocytes are white blood cells (WBCs) bound to TCRs on their surface. These T cells are produced from bone marrow and then mature in thymus by positive and negative selection. Positive selection produces self MHC restricted T cell population, i.e. T cells whose TCRs can recognize self MHC molecules. Negative selection produces self tolerant T cell population. T cells play a key role in immunity, from immune surveillance to immune defense. TCRs recognize antigens bound to major histocompatibility complex (MHCI/MHCII) molecules.

B cells/B lymphocytes are also WBCs, that are produced from hematopoietic stem cells from bone marrow but they are thymus independent (they mature in spleen) and are bound to BCRs (membrane bound immunoglobulin that differentiates B cells from other lymphocytes). Activation of B cells may be in T cell dependent or T cell independent way. B cells produce antibodies (IgA, IgM, IgE, IgD, IgG) that bind with bacterial and viral antigen and kill them.  IgA antibodies are present in nose, digestive tract, ears, and eyes and protect body surfaces that are exposed to foreign substances. IgG antibodies are present in all body fluids and play a vital role against bacterial and viral infection. IgM are present in blood and lymph fluid. IgE antibodies are present in lungs, skin and mucous membranes and help to fight against pollens, fungal spores etc.

The following are the B cell and T cell classifications, along with their functionalities.

Figure 1: B cell classification


Figure 2: T cell classification

So the T cells and B cells are the powerhouse of immunity. Abnormality in any of these cell types results in life threatening immune disorders. In my next post I will describe some of them.